STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vash2Vasohibin 2. (370 aa)    
Predicted Functional Partners:
svbp
Small vasohibin binding protein.
    
 0.979
ttl
Tubulin tyrosine ligase.
      
 0.693
ENSACLP00000007476
Ribitol xylosyltransferase 1.
     
 0.635
map2k5
Mitogen-activated protein kinase kinase 5; Belongs to the protein kinase superfamily.
      
 0.603
angptl7
Angiopoietin-like 7.
      
 0.544
nab1
NGFI-A binding protein 1a (EGR1 binding protein 1).
      
 0.509
ENSACLP00000000986
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
     
  0.443
pole3
Polymerase (DNA directed), epsilon 3 (p17 subunit).
     
  0.443
ENSACLP00000010605
DNA polymerase.
     
  0.443
ENSACLP00000017593
Polymerase (DNA directed), delta 2, regulatory subunit.
     
  0.443
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.