Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hgfacHGF activator. (622 aa)    
Predicted Functional Partners:
LOC113024201
Serpin peptidase inhibitor, clade G (C1 inhibitor), member 1; Belongs to the serpin family.
  
 0.966
spint1
Serine peptidase inhibitor, Kunitz type 1 a.
    
 0.941
LOC113037479
Uncharacterized protein.
    
 0.941
nme9
NME/NM23 family member 8; Belongs to the NDK family.
   
 0.911
c1qbp
Complement component 1, q subcomponent binding protein.
    
  0.905
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.894
LOC113022284
Macrophage stimulating 1 receptor a.
    
 0.894
mst1r
Macrophage stimulating 1 receptor b.
    
 0.894
ENSACLP00000017156
WD repeat domain 90.
    
 0.877
ENSACLP00000002194
LRRCT domain-containing protein.
    
 0.841
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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