Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113023503Calpain 1, (mu/I) large subunit b; Belongs to the peptidase C2 family. (702 aa)    
Predicted Functional Partners:
ENSACLP00000018503
Calpastatin.
    
 0.925
LOC113018945
Zgc:55262; Belongs to the peptidase C2 family.
   
 
  0.875
LOC113029596
Zgc:153993.
   
 
 0.872
ENSACLP00000012284
Uncharacterized protein.
     
  0.870
bax
Uncharacterized protein.
     
 0.849
ENSACLP00000006475
Uncharacterized protein.
     
 0.849
LOC113021474
Uncharacterized protein.
     
 0.848
LOC113021474-2
Apoptosis regulator BAX-like.
     
 0.848
ENSACLP00000030560
Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.
     
  0.782
ENSACLP00000030664
Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.
     
  0.782
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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