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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dimt1rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (337 aa)    
Predicted Functional Partners:
bysl
Bystin-like.
   
 
 0.999
LOC113016769
PWP2 small subunit processome component.
   
 
 0.998
tsr1
TSR1 ribosome maturation factor.
   
 
 0.997
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
   0.995
imp4
IMP U3 small nucleolar ribonucleoprotein 4.
   
   0.993
ltv1
LTV1 ribosome biogenesis factor.
   
 
 0.991
imp3
IMP U3 small nucleolar ribonucleoprotein 3.
  
 
 0.989
wdr36
WD repeat domain 36.
   
   0.988
wdr3
WD repeat domain 3.
   
   0.988
ENSACLP00000030784
Nucleolar complex associated 4 homolog.
   
   0.988
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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