STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000005869G protein-coupled receptor 25; Belongs to the G-protein coupled receptor 1 family. (351 aa)    
Predicted Functional Partners:
LOC113022754
Tankyrase_bdg_C domain-containing protein.
    
  0.604
gpr176
G protein-coupled receptor 176.
     
 0.592
LOC113036149
Trafficking protein particle complex 6b-like.
      
 0.537
polr3a
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
      
 0.533
ENSACLP00000033999
G protein-coupled receptor 27.
     
 0.527
tcta
T-cell leukemia translocation-altered gene protein homolog.
      
 0.519
PNPT1
Polyribonucleotide nucleotidyltransferase 1.
      
 0.471
bloc1s3
Biogenesis of lysosomal organelles complex-1, subunit 3.
      
 0.463
GPR45
G protein-coupled receptor 45.
     
0.462
gpr63
G protein-coupled receptor 63.
     
 0.462
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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