ENSACLP00000005869 protein (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSACLP00000005869

G protein-coupled receptor 25; Belongs to the G-protein coupled receptor 1 family. (351 aa)

Predicted Functional Partners:

creb3l1

0.729

LOC113036149

0.727

bloc1s3

0.700

tcta

0.693

atp6v1f

0.657

polr3a

0.637

ociad2

0.600

gpr176

0.549

LOC113013623

0.523

ENSACLP00000033999

0.519

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000005869	ENSACLP00000033999	ENSACLP00000005869	ENSACLP00000033999	G protein-coupled receptor 25; Belongs to the G-protein coupled receptor 1 family.	G protein-coupled receptor 27.	0.519
ENSACLP00000005869	LOC113013623	ENSACLP00000005869	ENSACLP00000006059	G protein-coupled receptor 25; Belongs to the G-protein coupled receptor 1 family.	Trafficking protein particle complex 6b.	0.523
ENSACLP00000005869	LOC113036149	ENSACLP00000005869	ENSACLP00000032664	G protein-coupled receptor 25; Belongs to the G-protein coupled receptor 1 family.	Trafficking protein particle complex 6b-like.	0.727
ENSACLP00000005869	atp6v1f	ENSACLP00000005869	ENSACLP00000008366	G protein-coupled receptor 25; Belongs to the G-protein coupled receptor 1 family.	V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.657
ENSACLP00000005869	bloc1s3	ENSACLP00000005869	ENSACLP00000032692	G protein-coupled receptor 25; Belongs to the G-protein coupled receptor 1 family.	Biogenesis of lysosomal organelles complex-1, subunit 3.	0.700
ENSACLP00000005869	creb3l1	ENSACLP00000005869	ENSACLP00000003386	G protein-coupled receptor 25; Belongs to the G-protein coupled receptor 1 family.	BZIP domain-containing protein.	0.729
ENSACLP00000005869	gpr176	ENSACLP00000005869	ENSACLP00000039217	G protein-coupled receptor 25; Belongs to the G-protein coupled receptor 1 family.	G protein-coupled receptor 176.	0.549
ENSACLP00000005869	ociad2	ENSACLP00000005869	ENSACLP00000024126	G protein-coupled receptor 25; Belongs to the G-protein coupled receptor 1 family.	OCIA domain containing 2.	0.600
ENSACLP00000005869	polr3a	ENSACLP00000005869	ENSACLP00000008868	G protein-coupled receptor 25; Belongs to the G-protein coupled receptor 1 family.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.637
ENSACLP00000005869	tcta	ENSACLP00000005869	ENSACLP00000021563	G protein-coupled receptor 25; Belongs to the G-protein coupled receptor 1 family.	T-cell leukemia translocation-altered gene protein homolog.	0.693
ENSACLP00000033999	ENSACLP00000005869	ENSACLP00000033999	ENSACLP00000005869	G protein-coupled receptor 27.	G protein-coupled receptor 25; Belongs to the G-protein coupled receptor 1 family.	0.519
LOC113013623	ENSACLP00000005869	ENSACLP00000006059	ENSACLP00000005869	Trafficking protein particle complex 6b.	G protein-coupled receptor 25; Belongs to the G-protein coupled receptor 1 family.	0.523
LOC113013623	LOC113036149	ENSACLP00000006059	ENSACLP00000032664	Trafficking protein particle complex 6b.	Trafficking protein particle complex 6b-like.	0.547
LOC113013623	atp6v1f	ENSACLP00000006059	ENSACLP00000008366	Trafficking protein particle complex 6b.	V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.505
LOC113013623	bloc1s3	ENSACLP00000006059	ENSACLP00000032692	Trafficking protein particle complex 6b.	Biogenesis of lysosomal organelles complex-1, subunit 3.	0.487
LOC113013623	tcta	ENSACLP00000006059	ENSACLP00000021563	Trafficking protein particle complex 6b.	T-cell leukemia translocation-altered gene protein homolog.	0.601
LOC113036149	ENSACLP00000005869	ENSACLP00000032664	ENSACLP00000005869	Trafficking protein particle complex 6b-like.	G protein-coupled receptor 25; Belongs to the G-protein coupled receptor 1 family.	0.727
LOC113036149	LOC113013623	ENSACLP00000032664	ENSACLP00000006059	Trafficking protein particle complex 6b-like.	Trafficking protein particle complex 6b.	0.547
LOC113036149	atp6v1f	ENSACLP00000032664	ENSACLP00000008366	Trafficking protein particle complex 6b-like.	V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.683
LOC113036149	bloc1s3	ENSACLP00000032664	ENSACLP00000032692	Trafficking protein particle complex 6b-like.	Biogenesis of lysosomal organelles complex-1, subunit 3.	0.701