ENSACLP00000005873 protein (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSACLP00000005873

Uncharacterized protein. (378 aa)

Predicted Functional Partners:

tekt3

0.941

efhc2

0.923

LOC113026897

0.866

LOC113029596

0.854

bcl2l1

0.854

vdac1

0.854

apaf1

0.854

trap1

0.854

efhb

0.849

cfap52

0.848

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000005873	LOC113026897	ENSACLP00000005873	ENSACLP00000037900	Uncharacterized protein.	Tripartite motif containing 35-30.	0.866
ENSACLP00000005873	LOC113029596	ENSACLP00000005873	ENSACLP00000000007	Uncharacterized protein.	Zgc:153993.	0.854
ENSACLP00000005873	apaf1	ENSACLP00000005873	ENSACLP00000032714	Uncharacterized protein.	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	0.854
ENSACLP00000005873	bcl2l1	ENSACLP00000005873	ENSACLP00000010478	Uncharacterized protein.	BCL2 like 1.	0.854
ENSACLP00000005873	cfap52	ENSACLP00000005873	ENSACLP00000009139	Uncharacterized protein.	Cilia and flagella associated protein 52.	0.848
ENSACLP00000005873	efhb	ENSACLP00000005873	ENSACLP00000010978	Uncharacterized protein.	EF-hand domain family, member B.	0.849
ENSACLP00000005873	efhc2	ENSACLP00000005873	ENSACLP00000017485	Uncharacterized protein.	EF-hand domain (C-terminal) containing 2.	0.923
ENSACLP00000005873	tekt3	ENSACLP00000005873	ENSACLP00000039408	Uncharacterized protein.	Tektin 3.	0.941
ENSACLP00000005873	trap1	ENSACLP00000005873	ENSACLP00000041171	Uncharacterized protein.	TNF receptor-associated protein 1.	0.854
ENSACLP00000005873	vdac1	ENSACLP00000005873	ENSACLP00000020688	Uncharacterized protein.	Voltage-dependent anion channel 1.	0.854
LOC113026897	ENSACLP00000005873	ENSACLP00000037900	ENSACLP00000005873	Tripartite motif containing 35-30.	Uncharacterized protein.	0.866
LOC113026897	cfap52	ENSACLP00000037900	ENSACLP00000009139	Tripartite motif containing 35-30.	Cilia and flagella associated protein 52.	0.788
LOC113026897	efhb	ENSACLP00000037900	ENSACLP00000010978	Tripartite motif containing 35-30.	EF-hand domain family, member B.	0.809
LOC113026897	efhc2	ENSACLP00000037900	ENSACLP00000017485	Tripartite motif containing 35-30.	EF-hand domain (C-terminal) containing 2.	0.835
LOC113026897	tekt3	ENSACLP00000037900	ENSACLP00000039408	Tripartite motif containing 35-30.	Tektin 3.	0.938
LOC113029596	ENSACLP00000005873	ENSACLP00000000007	ENSACLP00000005873	Zgc:153993.	Uncharacterized protein.	0.854
LOC113029596	apaf1	ENSACLP00000000007	ENSACLP00000032714	Zgc:153993.	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	0.846
LOC113029596	bcl2l1	ENSACLP00000000007	ENSACLP00000010478	Zgc:153993.	BCL2 like 1.	0.997
LOC113029596	vdac1	ENSACLP00000000007	ENSACLP00000020688	Zgc:153993.	Voltage-dependent anion channel 1.	0.636
apaf1	ENSACLP00000005873	ENSACLP00000032714	ENSACLP00000005873	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	Uncharacterized protein.	0.854