Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113023505Calpain 2, (m/II) large subunit b; Belongs to the peptidase C2 family. (697 aa)    
Predicted Functional Partners:
ENSACLP00000018503
Calpastatin.
    
 0.918
ENSACLP00000027965
Talin 1.
    
 0.887
ENSACLP00000027995
FERM domain-containing protein.
    
 0.887
TLN2
Talin 2a.
    
 0.885
ENSACLP00000019539
I/LWEQ domain-containing protein.
    
 0.885
ENSACLP00000027966
Talin 2b.
    
 0.885
LOC113029596
Zgc:153993.
   
 
 0.873
bax
Uncharacterized protein.
     
 0.872
ENSACLP00000006475
Uncharacterized protein.
     
 0.872
ENSACLP00000012284
Uncharacterized protein.
     
  0.872
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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