NPFFR2 protein (Astatotilapia calliptera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

NPFFR2

Neuropeptide FF receptor 2; Belongs to the G-protein coupled receptor 1 family. (426 aa)

Predicted Functional Partners:

npff

0.867

LOC113014465

0.792

gnb5

0.724

ENSACLP00000020432

0.724

LOC113022298

0.724

GNB5

0.724

LOC113013015

0.724

gnb4

0.724

gnb3

0.724

LOC113013062

0.684

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000020432	GNB5	ENSACLP00000020432	ENSACLP00000021270	Guanine nucleotide binding protein (G protein), beta polypeptide 2.	Guanine nucleotide binding protein (G protein), beta 5b.	0.627
ENSACLP00000020432	LOC113013062	ENSACLP00000020432	ENSACLP00000001808	Guanine nucleotide binding protein (G protein), beta polypeptide 2.	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.	0.910
ENSACLP00000020432	LOC113014465	ENSACLP00000020432	ENSACLP00000034724	Guanine nucleotide binding protein (G protein), beta polypeptide 2.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.975
ENSACLP00000020432	NPFFR2	ENSACLP00000020432	ENSACLP00000005911	Guanine nucleotide binding protein (G protein), beta polypeptide 2.	Neuropeptide FF receptor 2; Belongs to the G-protein coupled receptor 1 family.	0.724
ENSACLP00000020432	gnb5	ENSACLP00000020432	ENSACLP00000011915	Guanine nucleotide binding protein (G protein), beta polypeptide 2.	Guanine nucleotide binding protein (G protein), beta 5a.	0.626
GNB5	ENSACLP00000020432	ENSACLP00000021270	ENSACLP00000020432	Guanine nucleotide binding protein (G protein), beta 5b.	Guanine nucleotide binding protein (G protein), beta polypeptide 2.	0.627
GNB5	LOC113013015	ENSACLP00000021270	ENSACLP00000025363	Guanine nucleotide binding protein (G protein), beta 5b.	Guanine nucleotide binding protein (G protein), beta polypeptide 1a.	0.635
GNB5	LOC113013062	ENSACLP00000021270	ENSACLP00000001808	Guanine nucleotide binding protein (G protein), beta 5b.	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.	0.839
GNB5	LOC113014465	ENSACLP00000021270	ENSACLP00000034724	Guanine nucleotide binding protein (G protein), beta 5b.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.934
GNB5	LOC113022298	ENSACLP00000021270	ENSACLP00000020590	Guanine nucleotide binding protein (G protein), beta 5b.	Guanine nucleotide binding protein (G protein), beta polypeptide 1b.	0.635
GNB5	NPFFR2	ENSACLP00000021270	ENSACLP00000005911	Guanine nucleotide binding protein (G protein), beta 5b.	Neuropeptide FF receptor 2; Belongs to the G-protein coupled receptor 1 family.	0.724
GNB5	gnb4	ENSACLP00000021270	ENSACLP00000028736	Guanine nucleotide binding protein (G protein), beta 5b.	Guanine nucleotide binding protein (G protein), beta polypeptide 4b.	0.627
LOC113013015	GNB5	ENSACLP00000025363	ENSACLP00000021270	Guanine nucleotide binding protein (G protein), beta polypeptide 1a.	Guanine nucleotide binding protein (G protein), beta 5b.	0.635
LOC113013015	LOC113013062	ENSACLP00000025363	ENSACLP00000001808	Guanine nucleotide binding protein (G protein), beta polypeptide 1a.	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.	0.964
LOC113013015	LOC113014465	ENSACLP00000025363	ENSACLP00000034724	Guanine nucleotide binding protein (G protein), beta polypeptide 1a.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.979
LOC113013015	LOC113022298	ENSACLP00000025363	ENSACLP00000020590	Guanine nucleotide binding protein (G protein), beta polypeptide 1a.	Guanine nucleotide binding protein (G protein), beta polypeptide 1b.	0.829
LOC113013015	NPFFR2	ENSACLP00000025363	ENSACLP00000005911	Guanine nucleotide binding protein (G protein), beta polypeptide 1a.	Neuropeptide FF receptor 2; Belongs to the G-protein coupled receptor 1 family.	0.724
LOC113013015	gnb5	ENSACLP00000025363	ENSACLP00000011915	Guanine nucleotide binding protein (G protein), beta polypeptide 1a.	Guanine nucleotide binding protein (G protein), beta 5a.	0.634
LOC113013062	ENSACLP00000020432	ENSACLP00000001808	ENSACLP00000020432	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.	Guanine nucleotide binding protein (G protein), beta polypeptide 2.	0.910
LOC113013062	GNB5	ENSACLP00000001808	ENSACLP00000021270	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.	Guanine nucleotide binding protein (G protein), beta 5b.	0.839