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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000005917Uncharacterized protein. (357 aa)    
Predicted Functional Partners:
ENSACLP00000017593
Polymerase (DNA directed), delta 2, regulatory subunit.
    
 0.727
ENSACLP00000010605
DNA polymerase.
   
 0.694
fancm
Uncharacterized protein.
    
 0.694
NET1
Uncharacterized protein.
    
 0.644
ENSACLP00000012800
Rho guanine nucleotide exchange factor (GEF) 3, like.
    
 0.644
arhgef3
Rho guanine nucleotide exchange factor (GEF) 3.
    
 0.644
LOC113009336
Neuroepithelial cell transforming 1.
    
 0.644
ENSACLP00000026497
Uncharacterized protein.
    
 0.644
ENSACLP00000026557
Uncharacterized protein.
    
 0.644
LOC113009331
Neuroepithelial cell transforming 1.
    
 0.644
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.