ENSACLP00000005929 protein (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSACLP00000005929

Eph receptor B2a. (989 aa)

Predicted Functional Partners:

efnb1

0.967

efnb3

0.929

efnb2

0.929

LOC113032405

0.870

ENSACLP00000008120

0.852

LOC113011684

0.838

efna1

0.824

LOC113008784

0.799

EFNA5

0.799

LOC113026046

0.799

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EFNA5	ENSACLP00000005929	ENSACLP00000021126	ENSACLP00000005929	Ephrin A5; Belongs to the ephrin family.	Eph receptor B2a.	0.799
EFNA5	ENSACLP00000008120	ENSACLP00000021126	ENSACLP00000008120	Ephrin A5; Belongs to the ephrin family.	RAS p21 protein activator (GTPase activating protein) 1a.	0.892
EFNA5	LOC113008784	ENSACLP00000021126	ENSACLP00000008101	Ephrin A5; Belongs to the ephrin family.	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	0.524
EFNA5	LOC113011684	ENSACLP00000021126	ENSACLP00000010771	Ephrin A5; Belongs to the ephrin family.	Ephrin-A2a; Belongs to the ephrin family.	0.610
EFNA5	LOC113032405	ENSACLP00000021126	ENSACLP00000027885	Ephrin A5; Belongs to the ephrin family.	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	0.854
EFNA5	efna1	ENSACLP00000021126	ENSACLP00000027948	Ephrin A5; Belongs to the ephrin family.	Ephrin-A1b; Belongs to the ephrin family.	0.843
EFNA5	efnb1	ENSACLP00000021126	ENSACLP00000036607	Ephrin A5; Belongs to the ephrin family.	Ephrin-B1; Belongs to the ephrin family.	0.808
EFNA5	efnb2	ENSACLP00000021126	ENSACLP00000033806	Ephrin A5; Belongs to the ephrin family.	Ephrin-B2a; Belongs to the ephrin family.	0.724
EFNA5	efnb3	ENSACLP00000021126	ENSACLP00000027976	Ephrin A5; Belongs to the ephrin family.	Ephrin-B3a; Belongs to the ephrin family.	0.756
ENSACLP00000005929	EFNA5	ENSACLP00000005929	ENSACLP00000021126	Eph receptor B2a.	Ephrin A5; Belongs to the ephrin family.	0.799
ENSACLP00000005929	ENSACLP00000008120	ENSACLP00000005929	ENSACLP00000008120	Eph receptor B2a.	RAS p21 protein activator (GTPase activating protein) 1a.	0.852
ENSACLP00000005929	LOC113008784	ENSACLP00000005929	ENSACLP00000008101	Eph receptor B2a.	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	0.799
ENSACLP00000005929	LOC113011684	ENSACLP00000005929	ENSACLP00000010771	Eph receptor B2a.	Ephrin-A2a; Belongs to the ephrin family.	0.838
ENSACLP00000005929	LOC113026046	ENSACLP00000005929	ENSACLP00000041137	Eph receptor B2a.	Ephrin-A5a; Belongs to the ephrin family.	0.799
ENSACLP00000005929	LOC113032405	ENSACLP00000005929	ENSACLP00000027885	Eph receptor B2a.	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	0.870
ENSACLP00000005929	efna1	ENSACLP00000005929	ENSACLP00000027948	Eph receptor B2a.	Ephrin-A1b; Belongs to the ephrin family.	0.824
ENSACLP00000005929	efnb1	ENSACLP00000005929	ENSACLP00000036607	Eph receptor B2a.	Ephrin-B1; Belongs to the ephrin family.	0.967
ENSACLP00000005929	efnb2	ENSACLP00000005929	ENSACLP00000033806	Eph receptor B2a.	Ephrin-B2a; Belongs to the ephrin family.	0.929
ENSACLP00000005929	efnb3	ENSACLP00000005929	ENSACLP00000027976	Eph receptor B2a.	Ephrin-B3a; Belongs to the ephrin family.	0.929
ENSACLP00000008120	EFNA5	ENSACLP00000008120	ENSACLP00000021126	RAS p21 protein activator (GTPase activating protein) 1a.	Ephrin A5; Belongs to the ephrin family.	0.892