Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SRCIN1SRC kinase signaling inhibitor 1. (1461 aa)    
Predicted Functional Partners:
slc43a1
Solute carrier family 43 member 1a.
    
 
 0.564
ENSACLP00000032652
Ankyrin repeat and sterile alpha motif domain containing 1B.
   
   0.562
mapre1
Microtubule-associated protein, RP/EB family, member 1b.
    
 
 0.558
ENSACLP00000013249
PDZ domain-containing protein.
    
 
 0.439
ENSACLP00000013323
PDZ domain-containing protein.
    
 
 0.439
ppp1r9b
Protein phosphatase 1, regulatory subunit 9Bb.
    
 
 0.439
fam171a1
Family with sequence similarity 171 member A1.
    
 
 0.420
fam171a2
Family with sequence similarity 171 member A2b.
    
 
 0.420
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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