STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113027077DDE_Tnp_1_7 domain-containing protein. (578 aa)    
Predicted Functional Partners:
ralbp1
RalA binding protein 1.
    
 0.928
exoc2
Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
    
 0.902
ENSACLP00000008120
RAS p21 protein activator (GTPase activating protein) 1a.
   
 0.880
LOC113033717
A-Raf proto-oncogene, serine/threonine kinase.
   
 0.867
braf
B-Raf proto-oncogene, serine/threonine kinase.
   
 0.867
ENSACLP00000033310
Neurofibromin 1b.
    
 0.852
sos2
Son of sevenless homolog 2 (Drosophila).
    
 0.848
ENSACLP00000006489
Son of sevenless homolog 1 (Drosophila).
    
 0.848
rassf5
Ras association domain family member 5.
    
 0.836
grb2
Growth factor receptor-bound protein 2b.
   
 0.834
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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