STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000005939calpain_III domain-containing protein. (81 aa)    
Predicted Functional Partners:
ENSACLP00000018503
Calpastatin.
   
 0.880
ENSACLP00000027966
Talin 2b.
    
  0.851
LOC113029596
Zgc:153993.
   
 
  0.826
TLN2
Talin 2a.
    
  0.826
ENSACLP00000019539
I/LWEQ domain-containing protein.
    
  0.826
ENSACLP00000027965
Talin 1.
    
  0.826
ENSACLP00000027995
FERM domain-containing protein.
    
  0.826
LOC113030738
Calpain, small subunit 1 b.
   
 0.757
CAPNS1
Calpain small subunit 1.
   
 0.757
ENSACLP00000036302
Leucine-rich repeats and guanylate kinase domain containing.
    
 
 0.612
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.