STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fam53bFamily with sequence similarity 53 member B. (419 aa)    
Predicted Functional Partners:
cyfip2
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
      
 0.655
LOC113036202
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
    
 
 0.639
LOC113030401
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 2; Belongs to the 14-3-3 family.
    
 
 0.639
ENSACLP00000015414
Uncharacterized protein.
    
 
 0.636
DCAF7
DDB1 and CUL4 associated factor 7.
    
 
 0.636
CNIH2
Cornichon family AMPA receptor auxiliary protein 2.
      
 0.545
cnih3
Cornichon family AMPA receptor auxiliary protein 3.
      
 0.545
ENSACLP00000007687
Dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B.
    
 
 0.474
dyrk1a
Dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b.
    
 
 0.474
LOC113022176
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
    
 
 0.424
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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