Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113031089Beta 3-glucosyltransferase b. (475 aa)    
Predicted Functional Partners:
ENSACLP00000000670
Beta 3-glucosyltransferase a.
     
  0.872
nelfb
Negative elongation factor complex member B.
    
 0.798
LOC113015818
Hexosyltransferase.
    
 0.737
ENSACLP00000030280
ST3 beta-galactoside alpha-2,3-sialyltransferase 5; Belongs to the glycosyltransferase 29 family.
    
 0.706
atpaf2
ATP synthase mitochondrial F1 complex assembly factor 2.
    
 
 0.694
spon1
Spondin 1a.
     
 0.678
LOC113025241
Uncharacterized protein.
     
 0.678
cfp
Uncharacterized protein.
    
 0.668
acbd6
Acyl-CoA binding domain containing 6.
      
 0.662
tmem53
Transmembrane protein 53.
      
 0.661
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.