STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dnajc27DnaJ (Hsp40) homolog, subfamily C, member 27. (273 aa)    
Predicted Functional Partners:
LOC113015988
Zgc:85722.
    
   0.919
LOC113033143
Uncharacterized protein.
   
  0.837
LOC113025713
Uncharacterized protein.
   
  0.837
lrrc61
Leucine rich repeat containing 61.
    
  0.804
blzf1
Basic leucine zipper nuclear factor 1.
    
 0.795
dnajc10
DnaJ (Hsp40) homolog, subfamily C, member 10.
   
 0.782
ccdc186
Si:ch211-225b10.4.
    
 
 0.762
dnajc9
DnaJ (Hsp40) homolog, subfamily C, member 9.
    
 0.735
dnajc25
DnaJ (Hsp40) homolog, subfamily C, member 25.
    
 0.726
rabggtb
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.721
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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