Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zbtb8osZinc finger and BTB domain containing 8 opposite strand. (168 aa)    
Predicted Functional Partners:
rtcb
RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs.
  
 0.998
fam98b
Family with sequence similarity 98 member B.
    
 0.914
ddx1
DEAD (Asp-Glu-Ala-Asp) box helicase 1.
     
 0.850
etf1
Eukaryotic translation termination factor 1b.
  
    0.793
rtraf
RNA transcription, translation and transport factor.
     
 0.748
ENSACLP00000003301
Si:dkeyp-118h3.6.
     
 0.745
rtca
RNA 3'-terminal phosphate cyclase.
   
 
 0.738
zbtb8a
Zinc finger and BTB domain containing 8A.
    
 
 0.679
ENSACLP00000038322
THUMP domain containing 2.
      
 0.679
extl2
Exostosin-like glycosyltransferase 2.
      
 0.650
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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