STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113015524Uncharacterized protein. (645 aa)    
Predicted Functional Partners:
atf7ip
Activating transcription factor 7 interacting protein.
   
 0.971
ENSACLP00000038125
DDE_Tnp_1_7 domain-containing protein.
   
 0.949
arl14ep
ADP-ribosylation factor-like 14 effector protein.
    
 
 0.918
suv39h1
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
    
0.917
LOC113022928
SET domain and mariner transposase fusion gene.
    
0.912
dot1l
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
    
 0.897
prdm4
PR domain containing 4.
   
 0.882
ENSACLP00000029365
Lysine (K)-specific methyltransferase 2E.
    
 0.875
LOC113028169
Uncharacterized protein.
   
 0.870
ENSACLP00000026500
Zinc finger protein.
   
 0.869
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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