Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000006020Si:dkeyp-110a12.4. (358 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.836
ENSACLP00000008539
Uncharacterized protein.
   
 
  0.700
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
  0.700
frem1
Fras1 related extracellular matrix 1a.
    
 0.673
ENSACLP00000030575
Fras1 related extracellular matrix 1b.
    
 0.673
ENSACLP00000001877
Fraser extracellular matrix complex subunit 1.
    
 0.668
ENSACLP00000023157
Si:ch211-252f13.5.
  
 
  0.620
imp3
IMP U3 small nucleolar ribonucleoprotein 3.
    
  0.608
ENSACLP00000031739
Si:dkey-21a6.5.
  
 
 0.587
LOC113007418
RAN binding protein 2.
    
  0.585
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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