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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apmapAdipocyte plasma membrane associated protein. (415 aa)    
Predicted Functional Partners:
ENSACLP00000030248
Ferredoxin-fold anticodon binding domain containing 1.
  
  
 0.890
LOC113017580
Ferredoxin-fold anticodon-binding domain-containing protein 1-like.
  
  
 0.890
trnt1
tRNA nucleotidyl transferase, CCA-adding, 1; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
  
 0.880
tsfm
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
  
  
 0.878
mtif2
Mitochondrial translational initiation factor 2.
  
  
 0.865
ENSACLP00000008177
Eukaryotic translation initiation factor 5B.
  
  
 0.865
exosc10
Exosome component 10.
   
 
 0.857
ENSACLP00000032040
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
  
  
 0.855
imp3
IMP U3 small nucleolar ribonucleoprotein 3.
  
  
 0.846
rps9
Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
  
  
 0.846
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.