Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSACLP00000006037Lactamase, beta-like 1a. (536 aa)    
Predicted Functional Partners:
acadm
Acyl-CoA dehydrogenase medium chain.
     
  0.800
aifm3
Apoptosis inducing factor mitochondria associated 3.
     
  0.650
LOC113031263
Apoptosis inducing factor mitochondria associated 5.
     
  0.650
ENSACLP00000030711
Apoptosis inducing factor mitochondria associated 4.
     
  0.650
zbtb44
Zinc finger and BTB domain containing 44.
   
 
 0.617
LOC113031405
Cytochrome b5 reductase 4.
   
 0.557
klhl24
Kelch-like family member 24a.
      
 0.528
lemd3
LEM domain containing 3.
      
 0.526
aplp2
Amyloid beta (A4) precursor-like protein 2.
    
 0.518
CASK
Uncharacterized protein; Belongs to the MAGUK family.
   
  0.515
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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