Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CST7Cystatin F. (142 aa)    
Predicted Functional Partners:
tyrobp
Uncharacterized protein.
   
  
 0.767
LOC113036280
Purinergic receptor P2Y12.
      
 0.728
ENSACLP00000041064
Apolipoprotein Eb.
      
 0.715
LOC113027310
Transmembrane protein 119b.
      
 0.710
fgl2
Fibrinogen-like 2a.
   
  
 0.667
LOC113014966
Apolipoprotein Ea.
      
 0.587
ENSACLP00000018201
Solute carrier family 38 member 11.
      
 0.587
ctsc
Cathepsin C; Belongs to the peptidase C1 family.
   
 
 0.585
lgmn
Legumain.
      
 0.531
LOC113013742
Uncharacterized protein.
      
 0.519
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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