Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000006044PR domain containing 1a, with ZNF domain. (763 aa)    
Predicted Functional Partners:
kiz
Kizuna centrosomal protein.
    
  0.774
satb2
DNA-binding protein SATB.
      
 0.763
fancm
Uncharacterized protein.
    
   0.761
sox17
SRY-box transcription factor 17.
    
 0.754
ENSACLP00000035595
Forkhead box Q1b.
    
 
 0.754
LOC113020448
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
      
 0.734
ENSACLP00000029841
Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily.
    
 
 0.723
nanos3
Nanos homolog 3; Belongs to the nanos family.
     
 0.715
SOX18
SRY-box transcription factor 18.
    
 0.712
LOC113015405
Exostoses (multiple) 1c; Belongs to the glycosyltransferase 47 family.
      
 0.703
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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