STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000006076Syntaxin 11a; Belongs to the syntaxin family. (307 aa)    
Predicted Functional Partners:
VAMP3
Vesicle associated membrane protein 3.
    
 0.898
snap23
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
    
 0.861
vamp7
Synaptobrevin-like 1; Belongs to the synaptobrevin family.
    
 0.841
LOC113017483
Si:ch73-234b20.5.
    
 0.833
LOC113017483-2
Vesicle-associated membrane protein 8-like.
    
 0.833
ykt6
YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family.
    
 0.832
LOC113034002
Vesicle-associated membrane protein 8 (endobrevin).
    
 0.826
LOC113030433
Vesicle-associated membrane protein 2.
    
 0.822
LOC113015302
Vesicle-associated membrane protein 1.
    
 0.822
ENSACLP00000035872
Zgc:92912.
    
 0.822
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.