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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000006076Syntaxin 11a; Belongs to the syntaxin family. (307 aa)    
Predicted Functional Partners:
snap23
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.977
vamp7
Synaptobrevin-like 1; Belongs to the synaptobrevin family.
    
 0.937
STX19
Syntaxin 19.
     
 
0.934
STX11
Syntaxin 11.
  
  
 
0.914
stx5
Syntaxin 5A; Belongs to the syntaxin family.
    
 0.914
STX11-3
t-SNARE coiled-coil homology domain-containing protein.
  
  
 
0.914
STX11-2
Syntaxin 11.
  
  
 
0.913
LOC113034002
Vesicle-associated membrane protein 8 (endobrevin).
    
 0.903
stx7
Syntaxin 7-like; Belongs to the syntaxin family.
    
0.897
stx12
Syntaxin 12; Belongs to the syntaxin family.
    
 0.897
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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