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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000006078Myosin XVI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1912 aa)    
Predicted Functional Partners:
ENSACLP00000007689
Uncharacterized protein.
    
 0.693
LOC113025499
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
     
 0.626
ENSACLP00000013773
Tight junction protein 1b; Belongs to the MAGUK family.
    
 0.574
ENSACLP00000027191
Uncharacterized protein.
    
 0.574
LOC113021929
Tight junction protein 1a; Belongs to the MAGUK family.
    
 0.574
tjp2
Tight junction protein 2a (zona occludens 2); Belongs to the MAGUK family.
    
 0.574
LPIN2
Lipin 2.
    
 0.542
lpin1
Si:ch73-21k16.1.
    
 0.542
LOC113022730
Zgc:123305.
    
 0.542
LOC113024476
Lipin 1.
    
 0.542
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.