ENSACLP00000006078 protein (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSACLP00000006078

Myosin XVI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1912 aa)

Predicted Functional Partners:

LOC113025499

0.733

caln1

0.680

TMEM236

0.650

ENSACLP00000019312

0.650

ENSACLP00000007689

0.649

slc66a3

0.632

gpd1l

0.519

LOC113016705

0.519

gpd1

0.519

ENSACLP00000034199

0.518

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000006078	ENSACLP00000007689	ENSACLP00000006078	ENSACLP00000007689	Myosin XVI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.649
ENSACLP00000006078	ENSACLP00000019312	ENSACLP00000006078	ENSACLP00000019312	Myosin XVI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Transmembrane protein 236.	0.650
ENSACLP00000006078	ENSACLP00000034199	ENSACLP00000006078	ENSACLP00000034199	Myosin XVI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Kinase suppressor of ras 2.	0.518
ENSACLP00000006078	LOC113016705	ENSACLP00000006078	ENSACLP00000015177	Myosin XVI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Glycerol-3-phosphate dehydrogenase [NAD(+)].	0.519
ENSACLP00000006078	LOC113025499	ENSACLP00000006078	ENSACLP00000040804	Myosin XVI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.	0.733
ENSACLP00000006078	TMEM236	ENSACLP00000006078	ENSACLP00000001502	Myosin XVI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Transmembrane protein 236.	0.650
ENSACLP00000006078	caln1	ENSACLP00000006078	ENSACLP00000027439	Myosin XVI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Calneuron 1.	0.680
ENSACLP00000006078	gpd1	ENSACLP00000006078	ENSACLP00000031336	Myosin XVI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Glycerol-3-phosphate dehydrogenase [NAD(+)].	0.519
ENSACLP00000006078	gpd1l	ENSACLP00000006078	ENSACLP00000007888	Myosin XVI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Glycerol-3-phosphate dehydrogenase [NAD(+)].	0.519
ENSACLP00000006078	slc66a3	ENSACLP00000006078	ENSACLP00000037744	Myosin XVI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Solute carrier family 66 member 3.	0.632
ENSACLP00000007689	ENSACLP00000006078	ENSACLP00000007689	ENSACLP00000006078	Uncharacterized protein.	Myosin XVI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.649
ENSACLP00000007689	slc66a3	ENSACLP00000007689	ENSACLP00000037744	Uncharacterized protein.	Solute carrier family 66 member 3.	0.416
ENSACLP00000019312	ENSACLP00000006078	ENSACLP00000019312	ENSACLP00000006078	Transmembrane protein 236.	Myosin XVI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.650
ENSACLP00000019312	ENSACLP00000034199	ENSACLP00000019312	ENSACLP00000034199	Transmembrane protein 236.	Kinase suppressor of ras 2.	0.512
ENSACLP00000019312	caln1	ENSACLP00000019312	ENSACLP00000027439	Transmembrane protein 236.	Calneuron 1.	0.650
ENSACLP00000034199	ENSACLP00000006078	ENSACLP00000034199	ENSACLP00000006078	Kinase suppressor of ras 2.	Myosin XVI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.518
ENSACLP00000034199	ENSACLP00000019312	ENSACLP00000034199	ENSACLP00000019312	Kinase suppressor of ras 2.	Transmembrane protein 236.	0.512
ENSACLP00000034199	LOC113016705	ENSACLP00000034199	ENSACLP00000015177	Kinase suppressor of ras 2.	Glycerol-3-phosphate dehydrogenase [NAD(+)].	0.427
ENSACLP00000034199	TMEM236	ENSACLP00000034199	ENSACLP00000001502	Kinase suppressor of ras 2.	Transmembrane protein 236.	0.512
ENSACLP00000034199	caln1	ENSACLP00000034199	ENSACLP00000027439	Kinase suppressor of ras 2.	Calneuron 1.	0.576