STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113009051Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family. (939 aa)    
Predicted Functional Partners:
LOC113010138
Integrin beta; Belongs to the integrin beta chain family.
   
 0.953
itgb1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.953
ENSACLP00000033830
Integrin beta.
   
 0.952
itgb8
Integrin beta; Belongs to the integrin beta chain family.
    
 0.932
ENSACLP00000031964
Integrin beta; Belongs to the integrin beta chain family.
   
 0.921
ENSACLP00000016233
Integrin beta; Belongs to the integrin beta chain family.
   
 0.914
LAMC2
Laminin subunit gamma 2.
    
 0.898
ENSACLP00000008918
Integrin, alpha 6b; Belongs to the integrin alpha chain family.
  
  
 
0.888
LOC113008411
Integrin beta.
   
 0.888
LOC113008160
Integrin, alpha 6a; Belongs to the integrin alpha chain family.
  
  
 
0.887
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.