slc4a2 protein (Astatotilapia calliptera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

slc4a2

Anion exchange protein. (1253 aa)

Predicted Functional Partners:

LOC113014012

0.857

LOC113010962

0.638

ENSACLP00000011183

0.638

ENSACLP00000028672

0.620

ENSACLP00000014122

0.612

slc26a3

0.612

LOC113022401

0.612

slc26a2

0.568

LOC113025925

0.568

ENSACLP00000016464

0.553

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000011183	slc4a2	ENSACLP00000011183	ENSACLP00000006096	Alpha-carbonic anhydrase domain-containing protein; Belongs to the alpha-carbonic anhydrase family.	Anion exchange protein.	0.638
ENSACLP00000014122	LOC113025925	ENSACLP00000014122	ENSACLP00000035669	Si:ch211-117c9.2.	Sulfate anion transporter 1; Mediates sulfate transport with high affinity. Mediates oxalate transport. Mediates bicarbonate transport. Does not accept succinate as cosubstrate; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.	0.815
ENSACLP00000014122	slc26a2	ENSACLP00000014122	ENSACLP00000026587	Si:ch211-117c9.2.	Sulfate transporter; Sulfate transporter. May play a role in endochondral bone formation; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.	0.815
ENSACLP00000014122	slc4a2	ENSACLP00000014122	ENSACLP00000006096	Si:ch211-117c9.2.	Anion exchange protein.	0.612
ENSACLP00000016464	slc4a2	ENSACLP00000016464	ENSACLP00000006096	Tyrosine-protein kinase.	Anion exchange protein.	0.553
ENSACLP00000028672	LOC113025925	ENSACLP00000028672	ENSACLP00000035669	Solute carrier family 26 member 6.	Sulfate anion transporter 1; Mediates sulfate transport with high affinity. Mediates oxalate transport. Mediates bicarbonate transport. Does not accept succinate as cosubstrate; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.	0.815
ENSACLP00000028672	slc26a2	ENSACLP00000028672	ENSACLP00000026587	Solute carrier family 26 member 6.	Sulfate transporter; Sulfate transporter. May play a role in endochondral bone formation; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.	0.815
ENSACLP00000028672	slc4a2	ENSACLP00000028672	ENSACLP00000006096	Solute carrier family 26 member 6.	Anion exchange protein.	0.620
LOC113010962	slc4a2	ENSACLP00000007693	ENSACLP00000006096	Carbonic anhydrase; Belongs to the alpha-carbonic anhydrase family.	Anion exchange protein.	0.638
LOC113014012	LOC113025925	ENSACLP00000008417	ENSACLP00000035669	Solute carrier family 26 member 10.	Sulfate anion transporter 1; Mediates sulfate transport with high affinity. Mediates oxalate transport. Mediates bicarbonate transport. Does not accept succinate as cosubstrate; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.	0.791
LOC113014012	slc26a2	ENSACLP00000008417	ENSACLP00000026587	Solute carrier family 26 member 10.	Sulfate transporter; Sulfate transporter. May play a role in endochondral bone formation; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.	0.791
LOC113014012	slc4a2	ENSACLP00000008417	ENSACLP00000006096	Solute carrier family 26 member 10.	Anion exchange protein.	0.857
LOC113022401	LOC113025925	ENSACLP00000027315	ENSACLP00000035669	Solute carrier family 26 member 6, like.	Sulfate anion transporter 1; Mediates sulfate transport with high affinity. Mediates oxalate transport. Mediates bicarbonate transport. Does not accept succinate as cosubstrate; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.	0.815
LOC113022401	slc26a2	ENSACLP00000027315	ENSACLP00000026587	Solute carrier family 26 member 6, like.	Sulfate transporter; Sulfate transporter. May play a role in endochondral bone formation; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.	0.815
LOC113022401	slc4a2	ENSACLP00000027315	ENSACLP00000006096	Solute carrier family 26 member 6, like.	Anion exchange protein.	0.612
LOC113025925	ENSACLP00000014122	ENSACLP00000035669	ENSACLP00000014122	Sulfate anion transporter 1; Mediates sulfate transport with high affinity. Mediates oxalate transport. Mediates bicarbonate transport. Does not accept succinate as cosubstrate; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.	Si:ch211-117c9.2.	0.815
LOC113025925	ENSACLP00000028672	ENSACLP00000035669	ENSACLP00000028672	Sulfate anion transporter 1; Mediates sulfate transport with high affinity. Mediates oxalate transport. Mediates bicarbonate transport. Does not accept succinate as cosubstrate; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.	Solute carrier family 26 member 6.	0.815
LOC113025925	LOC113014012	ENSACLP00000035669	ENSACLP00000008417	Sulfate anion transporter 1; Mediates sulfate transport with high affinity. Mediates oxalate transport. Mediates bicarbonate transport. Does not accept succinate as cosubstrate; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.	Solute carrier family 26 member 10.	0.791
LOC113025925	LOC113022401	ENSACLP00000035669	ENSACLP00000027315	Sulfate anion transporter 1; Mediates sulfate transport with high affinity. Mediates oxalate transport. Mediates bicarbonate transport. Does not accept succinate as cosubstrate; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.	Solute carrier family 26 member 6, like.	0.815
LOC113025925	slc26a3	ENSACLP00000035669	ENSACLP00000018308	Sulfate anion transporter 1; Mediates sulfate transport with high affinity. Mediates oxalate transport. Mediates bicarbonate transport. Does not accept succinate as cosubstrate; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.	Chloride anion exchanger; Chloride/bicarbonate exchanger. Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.	0.815