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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rmnd1Required for meiotic nuclear division 1 homolog. (415 aa)    
Predicted Functional Partners:
TRMT5
tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family.
   
  
 0.582
gtpbp10
GTP-binding protein 10 (putative).
   
  
 0.542
ENSACLP00000014943
UTP15 small subunit processome component.
      
 0.538
armt1
Acidic residue methyltransferase 1.
   
  
 0.537
tmem70
Transmembrane protein 70.
   
  
 0.536
UTP14C
UTP14C small subunit processome component.
      
 0.535
twnk
Twinkle mtDNA helicase.
      
 0.533
ENSACLP00000006127
Uncharacterized protein.
    
 
 0.528
mtrf1l
Mitochondrial translational release factor 1-like.
   
  
 0.473
mtif2
Mitochondrial translational initiation factor 2.
   
    0.429
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.