Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113020449Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (180 aa)    
Predicted Functional Partners:
cyfip2
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
    
  0.860
ENSACLP00000035348
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
    
  0.860
BRK1
BRICK1 subunit of SCAR/WAVE actin nucleating complex.
    
 0.858
nckap1l
NCK associated protein 1 like.
   
  0.857
gbf1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
    
 0.854
LOC113031235
Uncharacterized protein.
    
 0.853
ENSACLP00000039247
WASP family member 3b.
    
 0.853
copb1
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.842
arf1
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
     
  0.835
LOC113024641
Cytohesin 4b.
    
 0.830
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.