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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
washc4WASH complex subunit 4. (1171 aa)    
Predicted Functional Partners:
ENSACLP00000028338
WASH complex subunit 5.
  
 0.971
washc3
WASH complex subunit 3.
  
 
 0.939
washc1
WAS protein family homolog 1.
    
 0.887
ENSACLP00000040901
WAS protein family homolog 1.
    
 0.887
LOC113034649
CAP-ZIP_m domain-containing protein.
   
 
 0.870
LOC113031122
CAP-ZIP_m domain-containing protein.
   
 
 0.711
LOC113036727
Zgc:153184.
   
 
 0.711
vps35
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.569
LOC113025905
Ring finger and CCCH-type domains 2.
   
    0.547
LOC113024637
Uncharacterized protein.
      
 0.534
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.