Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC113018698G protein-coupled receptor 78b. (340 aa)    
Predicted Functional Partners:
brinp1
Bone morphogenetic protein/retinoic acid inducible neural-specific 1.
   
  
 0.512
LOC113022754
Tankyrase_bdg_C domain-containing protein.
    
  0.488
wdr35
WD repeat-containing protein 35.
     
 0.433
CPZ
Carboxypeptidase Z.
   
  
 0.432
LOC113023681
Carboxypeptidase Z.
   
  
 0.432
creb3l4
BZIP domain-containing protein.
      
 0.425
cacng2
Voltage-dependent calcium channel gamma-2 subunit; Regulates the trafficking and gating properties of AMPA- selective glutamate receptors (AMPARs). Promotes their targeting to the cell membrane and synapses and modulates their gating properties by slowing their rates of activation, deactivation and desensitization. Does not show subunit-specific AMPA receptor regulation and regulates all AMPAR subunits. Thought to stabilize the calcium channel in an inactivated (closed) state; Belongs to the PMP-22/EMP/MP20 family. CACNG subfamily.
   
  
 0.424
ENSACLP00000001074
Purkinje cell protein 4 like 1.
      
 0.417
uri1
URI1 prefoldin like chaperone.
      
 0.416
ENSACLP00000035225
Transforming growth factor, beta receptor associated protein 1.
      
 0.409
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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