Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSACLP00000006138Si:zfos-1192g2.3. (217 aa)    
Predicted Functional Partners:
ENSACLP00000015096
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.998
mrpl28
Mitochondrial ribosomal protein L28.
   
  0.989
mrpl32
Mitochondrial ribosomal protein L32.
  
 0.989
mrpl39
Mitochondrial ribosomal protein L39.
  
 0.989
mrpl42
Mitochondrial ribosomal protein L42.
   
  0.987
ENSACLP00000028949
Mitochondrial ribosomal protein L47.
   
  0.985
mrpl19
Mitochondrial ribosomal protein L19.
  
 0.984
mrpl9
Mitochondrial ribosomal protein L9.
  
 0.981
ENSACLP00000032040
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
  
 0.980
mrpl14
Mitochondrial ribosomal protein L14.
   
 0.980
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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