Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nelfcdNegative elongation factor complex member C/D. (628 aa)    
Predicted Functional Partners:
nelfe
Negative elongation factor complex member E.
    
 0.999
nelfa
Negative elongation factor complex member A.
    
 0.999
nelfb
Negative elongation factor complex member B.
   
 0.998
supt4h1
Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.
    
 0.980
ENSACLP00000016700
Transcription elongation factor SPT5.
    
 0.972
pccb
Propionyl-CoA carboxylase subunit beta.
  
 0.967
mccc2
Methylcrotonoyl-CoA carboxylase 2 (beta).
  
 0.967
LOC113008790
Si:ch211-198n5.11.
  
 0.967
LOC113013757
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a.
    
 0.958
LOC113022557
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1b.
    
 0.958
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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