Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
PSTKPhosphoseryl-tRNA kinase. (347 aa)    
Predicted Functional Partners:
sepsecs
O-phosphoseryl-tRNA(Sec) selenium transferase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis.
     
 0.985
sars1
Seryl-tRNA synthetase.
     
 0.985
sars2
Seryl-tRNA synthetase 2, mitochondrial.
     
 0.969
eefsec
Eukaryotic elongation factor, selenocysteine-tRNA-specific.
      
 0.894
tmem179b
Zgc:110591.
     
 0.859
LOC113013262
Si:ch211-207e14.4.
     
  0.824
il17rd
Interleukin 17 receptor D.
     
  0.824
kti12
KTI12 chromatin associated homolog.
      
 0.718
ENSACLP00000037505
Selenocysteine lyase.
      
 0.706
eif4a3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
      
 0.693
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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