ENSACLP00000006161 protein (Astatotilapia calliptera)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSACLP00000006161

Uncharacterized protein. (427 aa)

Predicted Functional Partners:

mixl1

0.808

LOC113012525

0.719

gata3

0.685

LOC113022847

0.685

GATA2

0.685

LOC113025878

0.663

ENSACLP00000010124

0.656

foxa1

0.656

foxa2

0.656

LOC113035216

0.644

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000006161	ENSACLP00000010124	ENSACLP00000006161	ENSACLP00000010124	Uncharacterized protein.	Fork-head domain-containing protein.	0.656
ENSACLP00000006161	GATA2	ENSACLP00000006161	ENSACLP00000036229	Uncharacterized protein.	GATA binding protein 2.	0.685
ENSACLP00000006161	LOC113012525	ENSACLP00000006161	ENSACLP00000020027	Uncharacterized protein.	Notochord homeobox.	0.719
ENSACLP00000006161	LOC113022847	ENSACLP00000006161	ENSACLP00000027595	Uncharacterized protein.	GATA binding protein 2a.	0.685
ENSACLP00000006161	LOC113025878	ENSACLP00000006161	ENSACLP00000031824	Uncharacterized protein.	POU domain protein.	0.663
ENSACLP00000006161	LOC113035216	ENSACLP00000006161	ENSACLP00000024921	Uncharacterized protein.	Homeobox domain-containing protein.	0.644
ENSACLP00000006161	foxa1	ENSACLP00000006161	ENSACLP00000023252	Uncharacterized protein.	Fork-head domain-containing protein.	0.656
ENSACLP00000006161	foxa2	ENSACLP00000006161	ENSACLP00000028108	Uncharacterized protein.	Forkhead box A2.	0.656
ENSACLP00000006161	gata3	ENSACLP00000006161	ENSACLP00000020525	Uncharacterized protein.	GATA binding protein 3.	0.685
ENSACLP00000006161	mixl1	ENSACLP00000006161	ENSACLP00000023062	Uncharacterized protein.	Mix paired-like homeobox.	0.808
ENSACLP00000010124	ENSACLP00000006161	ENSACLP00000010124	ENSACLP00000006161	Fork-head domain-containing protein.	Uncharacterized protein.	0.656
ENSACLP00000010124	GATA2	ENSACLP00000010124	ENSACLP00000036229	Fork-head domain-containing protein.	GATA binding protein 2.	0.738
ENSACLP00000010124	LOC113012525	ENSACLP00000010124	ENSACLP00000020027	Fork-head domain-containing protein.	Notochord homeobox.	0.640
ENSACLP00000010124	LOC113022847	ENSACLP00000010124	ENSACLP00000027595	Fork-head domain-containing protein.	GATA binding protein 2a.	0.738
ENSACLP00000010124	LOC113025878	ENSACLP00000010124	ENSACLP00000031824	Fork-head domain-containing protein.	POU domain protein.	0.632
ENSACLP00000010124	gata3	ENSACLP00000010124	ENSACLP00000020525	Fork-head domain-containing protein.	GATA binding protein 3.	0.738
ENSACLP00000010124	mixl1	ENSACLP00000010124	ENSACLP00000023062	Fork-head domain-containing protein.	Mix paired-like homeobox.	0.750
GATA2	ENSACLP00000006161	ENSACLP00000036229	ENSACLP00000006161	GATA binding protein 2.	Uncharacterized protein.	0.685
GATA2	ENSACLP00000010124	ENSACLP00000036229	ENSACLP00000010124	GATA binding protein 2.	Fork-head domain-containing protein.	0.738
GATA2	LOC113025878	ENSACLP00000036229	ENSACLP00000031824	GATA binding protein 2.	POU domain protein.	0.450