STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CERT1Ceramide transporter 1. (622 aa)    
Predicted Functional Partners:
LOC113009664
Casein kinase 1 gamma 2; Belongs to the protein kinase superfamily.
    
 0.872
ENSACLP00000018874
Casein kinase 1, gamma 1; Belongs to the protein kinase superfamily.
    
 0.872
LOC113011010
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.872
mospd2
Motile sperm domain containing 2.
    
 
 0.811
rangap1
RAN GTPase activating protein 1a.
    
   0.771
ENSACLP00000028094
Ran GTPase activating protein 1b.
    
   0.771
LOC113007418
RAN binding protein 2.
    
   0.723
LOC113021498
PPP1R35_C domain-containing protein.
      
 0.695
vapa
VAMP (vesicle-associated membrane protein)-associated protein A, like.
    
 0.686
ENSACLP00000031727
VAMP (vesicle-associated membrane protein)-associated protein B and C.
    
 0.686
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.