Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
znrf2Zinc and ring finger 2b. (216 aa)    
Predicted Functional Partners:
LOC113009238
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.907
LOC113026979
Ubiquitin-conjugating enzyme E2Nb; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.907
rspry1
Ring finger and SPRY domain containing 1.
      
 0.717
gpatch3
G patch domain containing 3.
      
 0.710
ENSACLP00000029276
Uncharacterized protein.
      
 0.699
arl2bp
ADP-ribosylation factor-like 2 binding protein.
      
 0.694
eaf1
ELL associated factor 1.
      
 0.670
LOC113006820
Zinc finger protein 512.
      
 0.654
RPS27A
Ribosomal protein S27a.
    
  0.644
mettl6
Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family.
      
 0.629
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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