Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC113027081Solute carrier family 41 member 2a. (502 aa)    
Predicted Functional Partners:
LOC113022842
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4a.
      
 0.696
arhgap35
Rho GTPase activating protein 35a.
      
 0.658
LOC113030215
Rho GTPase activating protein 35b.
      
 0.531
crebl2
cAMP responsive element binding protein-like 2.
      
 0.521
kcnk6
Potassium channel subfamily K member.
      
 0.521
LOC113016403
Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family.
      
 0.521
LOC113022525
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4b.
      
 0.484
LOC113015551
Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family.
      
 0.413
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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