LOC113015551 protein (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

LOC113015551

Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family. (162 aa)

Predicted Functional Partners:

mpc1

0.801

ykt6

0.798

stx16

0.732

cog6

0.728

stx5

0.684

LOC113026542

0.665

GOLT1B

0.665

kcnk6

0.626

LOC113009800

0.621

c23h1orf112

0.617

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GOLT1B	LOC113015551	ENSACLP00000031685	ENSACLP00000006232	Golgi transport 1Ba.	Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family.	0.665
GOLT1B	cog6	ENSACLP00000031685	ENSACLP00000035444	Golgi transport 1Ba.	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.	0.811
LOC113009800	LOC113015551	ENSACLP00000020288	ENSACLP00000006232	Solute carrier family 41 member 2b.	Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family.	0.621
LOC113009800	kcnk6	ENSACLP00000020288	ENSACLP00000026699	Solute carrier family 41 member 2b.	Potassium channel subfamily K member.	0.701
LOC113015551	GOLT1B	ENSACLP00000006232	ENSACLP00000031685	Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family.	Golgi transport 1Ba.	0.665
LOC113015551	LOC113009800	ENSACLP00000006232	ENSACLP00000020288	Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family.	Solute carrier family 41 member 2b.	0.621
LOC113015551	LOC113026542	ENSACLP00000006232	ENSACLP00000003940	Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family.	Golgi transport 1Bb.	0.665
LOC113015551	c23h1orf112	ENSACLP00000006232	ENSACLP00000000052	Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family.	Si:dkey-97o5.1.	0.617
LOC113015551	cog6	ENSACLP00000006232	ENSACLP00000035444	Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family.	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.	0.728
LOC113015551	kcnk6	ENSACLP00000006232	ENSACLP00000026699	Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family.	Potassium channel subfamily K member.	0.626
LOC113015551	mpc1	ENSACLP00000006232	ENSACLP00000012094	Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family.	Mitochondrial pyruvate carrier; Mediates the uptake of pyruvate into mitochondria. Belongs to the mitochondrial pyruvate carrier (MPC) (TC 2.A.105) family.	0.801
LOC113015551	stx16	ENSACLP00000006232	ENSACLP00000006812	Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family.	Syntaxin 16; Belongs to the syntaxin family.	0.732
LOC113015551	stx5	ENSACLP00000006232	ENSACLP00000026344	Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family.	Syntaxin 5A; Belongs to the syntaxin family.	0.684
LOC113015551	ykt6	ENSACLP00000006232	ENSACLP00000014402	Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family.	YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family.	0.798
LOC113026542	LOC113015551	ENSACLP00000003940	ENSACLP00000006232	Golgi transport 1Bb.	Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family.	0.665
LOC113026542	cog6	ENSACLP00000003940	ENSACLP00000035444	Golgi transport 1Bb.	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.	0.811
c23h1orf112	LOC113015551	ENSACLP00000000052	ENSACLP00000006232	Si:dkey-97o5.1.	Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family.	0.617
cog6	GOLT1B	ENSACLP00000035444	ENSACLP00000031685	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.	Golgi transport 1Ba.	0.811
cog6	LOC113015551	ENSACLP00000035444	ENSACLP00000006232	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.	Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family.	0.728
cog6	LOC113026542	ENSACLP00000035444	ENSACLP00000003940	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.	Golgi transport 1Bb.	0.811

page 1 of 2

Server load: low (14%) [HD]

Permalink

Network

Co-occurrence

Experiments

Neighborhood

Databases

Fusion

Textmining

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About