Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC113007881G protein-coupled receptor 89B. (455 aa)    
Predicted Functional Partners:
rabl3
RAB, member of RAS oncogene family-like 3.
    
 
 0.823
gtpbp8
GTP binding protein 8 (putative).
   
  
 0.789
ENSACLP00000007615
Acid phosphatase 6, lysophosphatidic; Belongs to the histidine acid phosphatase family.
      
 0.694
gpr108
G protein-coupled receptor 108.
    
 
 0.670
ENSACLP00000002721
Sulfatase modifying factor 1.
      
 0.667
rer1
Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.
      
 0.666
ENSACLP00000028584
Chromodomain helicase DNA binding protein 1-like.
   
  
 0.657
pdzk1
PDZ domain containing 1.
      
 0.607
srp54
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
      
 0.607
ENSACLP00000005950
Uncharacterized protein.
    
   0.602
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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