Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113013941Myelin transcription factor 1a. (1183 aa)    
Predicted Functional Partners:
ENSACLP00000018602
SIN3 transcription regulator family member Ab.
    
 
 0.611
haus5
SIN3 transcription regulator family member B.
    
 
 0.611
sin3a
SIN3 transcription regulator family member Aa.
    
 
 0.611
ENSACLP00000033310
Neurofibromin 1b.
      
 0.513
LOC113028842
Neurogenin 1.
   
  
 0.507
LOC113029756
Si:dkey-61p9.11.
     
 0.505
ENSACLP00000011916
Carrier domain-containing protein.
     
 0.505
fasn
Coiled-coil domain containing 57.
     
 0.505
ENSACLP00000002020
E2F transcription factor 8.
      
 0.472
e2f7
E2F transcription factor 7.
      
 0.472
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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