Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC113021340Casein kinase 1 delta; Belongs to the protein kinase superfamily. (404 aa)    
Predicted Functional Partners:
csnk1a1
Casein kinase 1, alpha 1; Belongs to the protein kinase superfamily.
   
  0.953
ltv1
LTV1 ribosome biogenesis factor.
    
 0.934
riok2
RIO kinase 2 (yeast).
   
 0.932
bysl
Bystin-like.
    
 0.930
tsr1
TSR1 ribosome maturation factor.
    
 0.926
nob1
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
    
 0.916
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
 0.912
ENSACLP00000015166
Neuronal PAS domain protein 2.
    
 0.911
ENSACLP00000015921
Clock circadian regulator b.
    
 0.911
CLOCK
Clock circadian regulator a.
    
 0.911
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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