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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
npepl1Aminopeptidase like 1. (523 aa)    
Predicted Functional Partners:
got2
Aspartate aminotransferase.
   
 0.784
ENSACLP00000035248
Ribosomal modification protein rimK-like family member A.
  
 
 0.780
gclm
Glutamate-cysteine ligase, modifier subunit.
   
  0.699
ENSACLP00000005363
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
   
 0.678
LOC113015686
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
   
 0.678
cth
Cystathionase (cystathionine gamma-lyase), like.
   
 
  0.669
nfs1
NFS1 cysteine desulfurase.
  
 
 0.668
ENSACLP00000037505
Selenocysteine lyase.
  
 
 0.668
LOC113033746
Glutamic-oxaloacetic transaminase 1 like 1.
   
 0.623
ENSACLP00000014846
Aspartate aminotransferase.
   
 0.623
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.