Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
npepl1Aminopeptidase like 1. (523 aa)    
Predicted Functional Partners:
atrip
Uncharacterized protein.
    
 
 0.792
got2
Aspartate aminotransferase.
  
 0.768
mcmbp
Minichromosome maintenance complex binding protein.
    
   0.768
prpf19
Pre-mRNA processing factor 19.
    
 
 0.747
ENSACLP00000013472
Centrosomal protein 76.
    
 0.735
npepps
Aminopeptidase.
  
 0.703
usp39
Ubiquitin specific peptidase 39.
      
 0.694
synrg
Synergin, gamma.
    
 0.683
gclc
Glutamate-cysteine ligase, catalytic subunit.
     
 0.677
gclm
Glutamate-cysteine ligase, modifier subunit.
   
  0.675
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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