STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hivep1Human immunodeficiency virus type I enhancer binding protein 1. (2634 aa)    
Predicted Functional Partners:
LOC113022754
Tankyrase_bdg_C domain-containing protein.
    
  0.589
LOC113008023
BRCA1 associated RING domain 1.
    
  0.585
ak9
Adenylate kinase 9.
    
  0.584
YTHDC2
YTH domain containing 2.
    
  0.555
ENSACLP00000034796
Translocase of outer mitochondrial membrane 20.
    
 0.547
sgk3
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
  0.530
LOC113031405
Cytochrome b5 reductase 4.
    
  0.503
LOC113036715
F-box and WD repeat domain containing 11b.
    
  0.501
nme9
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.501
setbp1
SET binding protein 1.
  
  0.489
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: medium (70%) [HD]