STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113028304Uncharacterized protein. (815 aa)    
Predicted Functional Partners:
ENSACLP00000022919
Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.
    
 0.957
ENSACLP00000008180
Poly [ADP-ribose] polymerase.
    
 0.951
xrcc1
X-ray repair complementing defective repair in Chinese hamster cells 1.
    
 
 0.938
parp3
Poly [ADP-ribose] polymerase.
    
 0.899
parg
Poly (ADP-ribose) glycohydrolase a.
     
  0.872
LOC113025253
Poly (ADP-ribose) glycohydrolase, like.
     
  0.872
parp4
Poly [ADP-ribose] polymerase.
    
 0.830
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
 
 0.826
ENSACLP00000001136
Von Willebrand factor A domain containing 5B2.
    
 0.792
ENSACLP00000025056
Si:dkey-117m1.4.
    
 0.792
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (40%) [HD]