Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC113023330RASD family member 3. (213 aa)    
Predicted Functional Partners:
ENSACLP00000037094
Im:7152348.
   
 0.800
LOC113010595
Nitric oxide synthase 1 (neuronal) adaptor protein b.
    
  0.770
ENSACLP00000036798
PID domain-containing protein.
    
  0.770
LOC113025520
Si:dkey-34e4.1.
    
  0.770
ENSACLP00000004237
Dedicator of cytokinesis 4b; Belongs to the DOCK family.
    
  0.765
met
MET proto-oncogene, receptor tyrosine kinase.
   
 0.698
LOC113022284
Macrophage stimulating 1 receptor a.
   
 0.698
mst1r
Macrophage stimulating 1 receptor b.
   
 0.698
ENSACLP00000030835
TSC complex subunit 2.
    
 0.686
ENSACLP00000003818
Uncharacterized protein.
   
 0.664
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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