STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crtamIg-like domain-containing protein. (444 aa)    
Predicted Functional Partners:
tbccd1
TBCC domain containing 1.
      
 0.538
ENSACLP00000004610
Protein-S-isoprenylcysteine O-methyltransferase.
      
 0.535
LOC113028923
Glucose-fructose oxidoreductase domain containing 1.
      
 0.534
gins1
GINS complex subunit 1 (Psf1 homolog).
      
 0.533
pibf1
Progesterone immunomodulatory binding factor 1.
      
 0.530
bckdhb
Branched chain keto acid dehydrogenase E1 subunit beta.
      
 0.530
LOC113035790
Cell adhesion molecule 1b.
    
 
0.488
LOC113030779
Cell adhesion molecule 1a.
    
 
0.488
sergef
Secretion regulating guanine nucleotide exchange factor.
      
 0.461
LOC113032075
Si:dkeyp-97a10.3.
  
 
   0.442
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.