Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
phf23PHD finger protein 23b. (320 aa)    
Predicted Functional Partners:
suds3
SDS3 homolog, SIN3A corepressor complex component.
    
 
 0.956
kansl2
KAT8 regulatory NSL complex subunit 2.
    
 0.888
LOC113029775
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
    
   0.843
ENSACLP00000034796
Translocase of outer mitochondrial membrane 20.
   
 
 0.837
sap30l
Sap30-like.
    
 
 0.817
ENSACLP00000018602
SIN3 transcription regulator family member Ab.
    
 
 0.816
haus5
SIN3 transcription regulator family member B.
    
 
 0.816
sin3a
SIN3 transcription regulator family member Aa.
    
 
 0.816
mcrs1
Microspherule protein 1.
    
 0.813
sap130
Sin3A-associated protein a.
    
   0.812
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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