STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000006409Pept_C1 domain-containing protein; Belongs to the peptidase C1 family. (255 aa)    
Predicted Functional Partners:
LOC113030168
Baculoviral IAP repeat containing 2.
     
 0.846
ENSACLP00000020683
Cathepsin S, ortholog 1; Belongs to the peptidase C1 family.
  
  
 
0.833
ENSACLP00000036974
X-linked inhibitor of apoptosis.
     
 0.833
LOC113013372
Baculoviral IAP repeat containing 5b.
     
 0.828
LOC113028579
Baculoviral IAP repeat containing 5a.
     
 0.828
ENSACLP00000012284
Uncharacterized protein.
     
 0.827
bcl2l1
BCL2 like 1.
     
 0.826
LOC113029594
BH4_2 domain-containing protein.
   
 
 0.799
bcl2
BCL2 apoptosis regulator b.
   
 
 0.799
ENSACLP00000002967
Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.723
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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