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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000006416Nudix (nucleoside diphosphate linked moiety X)-type motif 5; Belongs to the Nudix hydrolase family. (260 aa)    
Predicted Functional Partners:
nudt12
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
   
 0.937
nudt13
Nudix (nucleoside diphosphate linked moiety X)-type motif 13.
    
 0.920
nudt9
Nudix (nucleoside diphosphate linked moiety X)-type motif 9.
    
 0.908
ENSACLP00000024569
Transient receptor potential cation channel, subfamily M, member 2.
    
 0.908
ENSACLP00000031882
GDP-mannose pyrophosphorylase Ab.
  
 0.890
gmppb
GDP-mannose pyrophosphorylase B.
  
 0.868
ENSACLP00000018666
NTP_transferase domain-containing protein.
  
 0.868
LOC113035360
Phosphoribosyl pyrophosphate synthetase 1B.
    
 0.863
pgm1
Phosphoglucomutase 1; Belongs to the phosphohexose mutase family.
   
 
 0.858
ENSACLP00000019962
Uncharacterized protein; Belongs to the phosphohexose mutase family.
   
 
 0.858
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.